The detailed information of tRNA gene sequence


Sequence ID>W11157596
Genome IDAFCE01000197
Search identical group
Phylum/ClassBacillota
SpeciesCaldalkalibacillus thermarum TA2.A1 [AFCE]
Start position on genome 482
End posion on genome 558
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caccatcttt
tRNA gene sequence 
CGGGAAGTAGCTCAGCTTGGTAGAGCGCCACGTTCGGGACGTGGAAGTCGCAGGTTCAAA
TCCTGTCTTCCCGACCA
Downstream region at tRNA end position 
tttttttcta
Secondary structure (Cloverleaf model)
>W11157596	Pro	CGG
                   t      ACCA tttttttcta
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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