The detailed information of tRNA gene sequence


Sequence ID>W11160115
Genome IDAFEJ01000140
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAcaryochloris sp. CCMEE 5410 [AFEJ]
Start position on genome 42865
End posion on genome 42939
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgcgtttctT
tRNA gene sequence 
GGGGAATTAGCTCAGCTGGTAGAGTGCTGCGATCGCACCGCAGAGGTCAGGGGTTCGAAT
CCCCTATTCTCCATtg
Downstream region at tRNA end position 
gtccaaatcg
Secondary structure (Cloverleaf model)
>W11160115	Ala	CGC
                   T      ATtg gtccaaatcg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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