The detailed information of tRNA gene sequence


Sequence ID>W11160122
Genome IDAFEJ01000201
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAcaryochloris sp. CCMEE 5410 [AFEJ]
Start position on genome 4802
End posion on genome 4727
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttttctagtT
tRNA gene sequence 
GGGGCTGTGGCTCAGTTGGATAGAGCAAGCGCCTCCTAAGCGCTAGGTCGGCGGTTCGAG
TCCGCCCAGTCCCGTta
Downstream region at tRNA end position 
cttttttccc
Secondary structure (Cloverleaf model)
>W11160122	Arg	CCT
                   T      GTta cttttttccc
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T G A        G      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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