The detailed information of tRNA gene sequence


Sequence ID>W11161306
Genome IDAFGF01000018
Search identical group
Phylum/ClassBacillota
SpeciesAcetonema longum DSM 6540 [AFGF]
Start position on genome 3459
End posion on genome 3549
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcctatttt
tRNA gene sequence 
GGAGTGGTACTCAAGCGGCTGAAGAGGACGGTTTGCTAAATCGTTAGGGGTCGCAAGGCC
CGCCAGGGTTCAAATCCCTGCCACTCCGCCA
Downstream region at tRNA end position 
aaaaacaacc
Secondary structure (Cloverleaf model)
>W11161306	Ser	GCT
                   t      GCCA aaaaacaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G - C          T A
                    T     G T C C C     A
      C G A        A      | | | | |     A
    G       A C T C       C A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGGGTCGCAAGGCCCGC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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