The detailed information of tRNA gene sequence


Sequence ID>W11161342
Genome IDAFGF01000205
Search identical group
Phylum/ClassBacillota
SpeciesAcetonema longum DSM 6540 [AFGF]
Start position on genome 31461
End posion on genome 31550
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agtagagcac
tRNA gene sequence 
GGAGAGATGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGCGTGTGTATTCGAAAGGGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
taatttacct
Secondary structure (Cloverleaf model)
>W11161342	Ser	GGA
                   c      GCCA taatttacct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TGTATTCGAAAGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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