The detailed information of tRNA gene sequence


Sequence ID>W11163191
Genome IDAFHP01000083
Search identical group
Phylum/ClassBacteroidota
SpeciesCapnocytophaga sp. oral taxon 329 oral taxon 329 str. F0087 [AFHP]
Start position on genome 19510
End posion on genome 19597
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gaggaagcaa
tRNA gene sequence 
GGAAGTTTGGGTGAGTGGCTGAAACCACCAGTTTGCTAAACTGACGTGCGGGTTACCGTA
CCGGGGGTTCGAATCCCCCAGCTTCCGCtc
Downstream region at tRNA end position 
caaggcgtct
Secondary structure (Cloverleaf model)
>W11163191	Ser	GCT
                   a      GCtc caaggcgtct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T + G
                     T - A          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTGCGGGTTACCGTACC
                    C   A
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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