The detailed information of tRNA gene sequence


Sequence ID>W11163664
Genome IDAFIB01000043
Search identical group
Phylum/ClassUnclassified
SpeciesSAR324 cluster bacterium SCGC AAA001-C10 [AFIB]
Start position on genome 2886
End posion on genome 2800
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttatcagtat
tRNA gene sequence 
GCCGAGGTGGTGAAATTGGTAGACGCAACGGACTCAAAATCCGTCGGGAGTAATCCCGTG
GGGGTTCGATTCCCCCTCTCGGCACCA
Downstream region at tRNA end position 
gtttaatcaa
Secondary structure (Cloverleaf model)
>W11163664	Leu	CAA
                   t      ACCA gtttaatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T T
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       A G T G       G G G G G     C
    G         | + |                 T T
    G       A C G C
      T A G        A     CGGGAGTAATCCCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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