The detailed information of tRNA gene sequence


Sequence ID>W11164217
Genome IDAFJC01000011
Search identical group
Phylum/ClassCyanobacteriota
SpeciesMicrocoleus vaginatus FGP-2 [AFJC]
Start position on genome 139592
End posion on genome 139680
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttttcggtgT
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTTAAGGCGCTTTCCTGCTAAGAAAGAGCGGTTTAACAGCCG
TCGAGGGTTCAAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
tcccccgata
Secondary structure (Cloverleaf model)
>W11164217	Ser	GCT
                   T      GTtt tcccccgata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     AGCGGTTTAACAGCCGTC
                    C - G
                    T - A
                    T - A
                    T - A
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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