The detailed information of tRNA gene sequence


Sequence ID>W11164271
Genome IDAFJD01000005
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus ferrivorans SS3 [AFJD]
Start position on genome 100223
End posion on genome 100149
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgctcatttt
tRNA gene sequence 
GGGCGGTTAGCTCAGTGGTAGAGCACTGCCTTCACACGGCAGGGGCCAGTGGTTCGAACC
CACTACCGCCCACCA
Downstream region at tRNA end position 
taaaacaagc
Secondary structure (Cloverleaf model)
>W11164271	Val	CAC
                   t      ACCA taaaacaagc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C A
                    T     T C A C C     A
        G A        A      | | | | |     G
      T     C T C G       A G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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