The detailed information of tRNA gene sequence


Sequence ID>W11168168
Genome IDAFNU01000054
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaloplasma contractile SSD-17B [AFNU]
Start position on genome 6258
End posion on genome 6167
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tactttccat
tRNA gene sequence 
GGAGAAATACCCAAGTGGCTGAAGGGGCTAGCTTGGAAAGCTGGTAGGTCATTTTATATG
ATGCAGGGGTTCGAATCCCCTTTTCTCCGCCA
Downstream region at tRNA end position 
tagtagtagt
Secondary structure (Cloverleaf model)
>W11168168	Ser	GGA
                   t      GCCA tagtagtagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    G       A C C C       A G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTCATTTTATATGATGC
                    C - G
                    T + G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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