The detailed information of tRNA gene sequence


Sequence ID>W11168180
Genome IDAFNU01000084
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaloplasma contractile SSD-17B [AFNU]
Start position on genome 163
End posion on genome 251
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caccattcaa
tRNA gene sequence 
GCCTGGATGGCGGAATTGGTAGACGCACAGGACTTAAAATCCTGCGGGAGTTAAATCCCG
TGCCGGTTCGACTCCGGCTCTAGGCACCA
Downstream region at tRNA end position 
tatatggcgg
Secondary structure (Cloverleaf model)
>W11168180	Leu	TAA
                   a      ACCA tatatggcgg
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     A - T          T C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G C G       G C C G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGGGAGTTAAATCCCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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