The detailed information of tRNA gene sequence


Sequence ID>W11168184
Genome IDAFNU01000084
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaloplasma contractile SSD-17B [AFNU]
Start position on genome 566
End posion on genome 642
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acactaatat
tRNA gene sequence 
CGCGGGGTAGAGCAGTTCGGTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCAAA
TCCTGTCCCCGCAACCA
Downstream region at tRNA end position 
aatggtcccg
Secondary structure (Cloverleaf model)
>W11168184	Met	CAT
                   t      ACCA aatggtcccg
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     A
    T       C G A G       A C A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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