The detailed information of tRNA gene sequence


Sequence ID>W11168192
Genome IDAFNU01000105
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaloplasma contractile SSD-17B [AFNU]
Start position on genome 355
End posion on genome 280
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaataaacaa
tRNA gene sequence 
GGTCCCGTGGTGTAGCGGTTAACATGCCTGCCTGTCACGCAGGAGATCGCGAGTTCGATT
CTCGTCGGGACCGCCA
Downstream region at tRNA end position 
taaaaaaagc
Secondary structure (Cloverleaf model)
>W11168192	Asp	GTC
                   a      GCCA taaaaaaagc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G C T C     A
      C G A        G      + | | | |     G
    G       T G T G       G C G A G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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