The detailed information of tRNA gene sequence


Sequence ID>W11168355
Genome IDAFOC01000017
Search identical group
Phylum/ClassGammaproteobacteria
Speciesendosymbiont of Riftia pachyptila Riftia pachyptila (vent Ph05) [AFOC]
Start position on genome 39517
End posion on genome 39442
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
tccctttttg
tRNA gene sequence 
GCCGATGTAGCTCAGTCGGTAGAGCAACTGATTCGTAATCAGTAGGTCAGCGGTTCAATT
CCGCTCATCGGCTCCA
Downstream region at tRNA end position 
tacttcccag
Secondary structure (Cloverleaf model)
>W11168355	Thr	CGT
                   g      TCCA tacttcccag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T T
                    T     T C G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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