The detailed information of tRNA gene sequence


Sequence ID>W11168379
Genome IDAFOC01000125
Search identical group
Phylum/ClassGammaproteobacteria
Speciesendosymbiont of Riftia pachyptila Riftia pachyptila (vent Ph05) [AFOC]
Start position on genome 7640
End posion on genome 7715
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
tcaatgcaat
tRNA gene sequence 
TCCCCGGTAGCTCAGTCGGTAGAGCGGGTGACTGTTAATCACTAGGTCGGCAGTTCGAGC
CTGTCCCGGGGAGCCA
Downstream region at tRNA end position 
tattgcctta
Secondary structure (Cloverleaf model)
>W11168379	Asn	GTT
                   t      GCCA tattgcctta
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          C G
                    T     C T G T C     A
      T G A        A      | + | | |     G
    C       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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