The detailed information of tRNA gene sequence


Sequence ID>W11168529
Genome IDAFOH01000040
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans ATCC 19377 [AFOH]
Start position on genome 24140
End posion on genome 24214
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttagtactt
tRNA gene sequence 
GGGTCGTTAGCTCAGAGGTAGAGCGCCGCCTTCACACGGCGGAGGTCAGTGGTTCGAAAC
CACTACGACCCACCA
Downstream region at tRNA end position 
tcatttatct
Secondary structure (Cloverleaf model)
>W11168529	Val	CAC
                   t      ACCA tcatttatct
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          A A
                    T     T C A C C     A
        G A        A      | | | | |     G
      A     C T C G       A G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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