The detailed information of tRNA gene sequence


Sequence ID>W11168548
Genome IDAFOH01000122
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus thiooxidans ATCC 19377 [AFOH]
Start position on genome 41623
End posion on genome 41697
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tgcgggctgc
tRNA gene sequence 
AGGCGCGTAGCTCAGGGGGAGAGCGCTACCTTGACACGGTAGAGGTCGGCGGTTCGAAAC
CGCCCGTGCCTACCA
Downstream region at tRNA end position 
aatcccgcac
Secondary structure (Cloverleaf model)
>W11168548	Val	GAC
                   c      ACCA aatcccgcac
                     A - T
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          A A
                    T     C C G C C     A
        G A        A      | | | | |     G
      G     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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