The detailed information of tRNA gene sequence


Sequence ID>W11169002
Genome IDAFOO01000011
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae HCUF01 [AFOO]
Start position on genome 26530
End posion on genome 26606
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatatatgga
tRNA gene sequence 
CGCGGGATGGAGCAGCTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCAACCA
Downstream region at tRNA end position 
atttcaaagc
Secondary structure (Cloverleaf model)
>W11169002	Met	CAT
                   a      ACCA atttcaaagc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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