The detailed information of tRNA gene sequence


Sequence ID>W11169029
Genome IDAFOO01000015
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae HCUF01 [AFOO]
Start position on genome 527155
End posion on genome 527241
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gattttgcgt
tRNA gene sequence 
GCCCTGGTGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGACTTTCGAGTCGTG
CCGGTTCAAGTCCGGCCCGGGGCACCA
Downstream region at tRNA end position 
tctccatttc
Secondary structure (Cloverleaf model)
>W11169029	Leu	TAA
                   t      ACCA tctccatttc
                     G - C
                     C - G
                     C - G
                     C - G
                     T + G
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T A A        G      | | | | |     A
    C       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGACTTTCGAGTCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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