The detailed information of tRNA gene sequence


Sequence ID>W11169922
Genome IDAFOZ01000033
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShewanella sp. HN-41 [AFOZ]
Start position on genome 1957
End posion on genome 2032
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
cacacagcga
tRNA gene sequence 
GGTCGATTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGGTCACTGGTTCGAGC
CCAGTAGCGACCACCA
Downstream region at tRNA end position 
tactttttcc
Secondary structure (Cloverleaf model)
>W11169922	Val	TAC
                   a      ACCA tactttttcc
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     A   G
                     T - A          C G
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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