The detailed information of tRNA gene sequence


Sequence ID>W11170341
Genome IDAFPK01000020
Search identical group
Phylum/ClassBacteroidota
SpeciesOchrovirga pacifica S85 [AFPK]
Start position on genome 16200
End posion on genome 16272
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tagtgttaag
tRNA gene sequence 
GGTCCGTTCGTCTAGGGGTTAGGACGCCAGGTTTTCATCCTGGTAACAGGGGTTCGATTC
CCCTACGGACTACtt
Downstream region at tRNA end position 
tttttattca
Secondary structure (Cloverleaf model)
>W11170341	Glu	TTC
                   g      ACtt tttttattca
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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