The detailed information of tRNA gene sequence


Sequence ID>W11170371
Genome IDAFPK01000070
Search identical group
Phylum/ClassBacteroidota
SpeciesOchrovirga pacifica S85 [AFPK]
Start position on genome 57950
End posion on genome 57867
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aagtactttt
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTAATGCAGCAGCCTGCTAAGCTGTCATCGTTTTTCGATGCCC
GGGTTCGAATCCCGGTCTCTCCGCac
Downstream region at tRNA end position 
aataagataa
Secondary structure (Cloverleaf model)
>W11170371	Ser	GCT
                   t      GCac aataagataa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G A C G       C C G G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CATCGTTTTTCGATGC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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