The detailed information of tRNA gene sequence


Sequence ID>W11170405
Genome IDAFPL01000026
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMarinobacterium stanieri S30 [AFPL]
Start position on genome 51536
End posion on genome 51612
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ggcgtgtaaa
tRNA gene sequence 
GCGCTCGTAGCTCAACCGGATAGAGCAACGGCCTTCTAAGCCGTAGGTTGCAGGTTCGAG
TCCTGCCGGGCGTGCCA
Downstream region at tRNA end position 
ggtcgtctag
Secondary structure (Cloverleaf model)
>W11170405	Arg	TCT
                   a      GCCA ggtcgtctag
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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