The detailed information of tRNA gene sequence


Sequence ID>W11170626
Genome IDAFPR01000111
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAcidiphilium sp. PM [AFPR]
Start position on genome 24014
End posion on genome 23938
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgcccacaac
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
ttgcgctgat
Secondary structure (Cloverleaf model)
>W11170626	Asp	GTC
                   c      GCCA ttgcgctgat
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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