The detailed information of tRNA gene sequence


Sequence ID>W11170749
Genome IDAFPT01000024
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesParacidovorax oryzae subsp. avenae RS-1 [AFPT]
Start position on genome 59241
End posion on genome 59316
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
cagcaatgtt
tRNA gene sequence 
GGGACGTTAGCTCAGTTGGTAGAGCAGCGGACTTTTAATCCGTTGGTCACAAGTTCGAAT
CTTGTACGTCCTACCA
Downstream region at tRNA end position 
aaatttttta
Secondary structure (Cloverleaf model)
>W11170749	Lys	TTT
                   t      ACCA aaatttttta
                     G + T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     T - A          T A
                    T     T G T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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