The detailed information of tRNA gene sequence


Sequence ID>W11171887
Genome IDAFQW01000058
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. TD01 [AFQW]
Start position on genome 25329
End posion on genome 25405
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
caacaacgtt
tRNA gene sequence 
CGGAATATAGCTCAGCTTGGTAGAGCGCTGCCTTCGGGAGGCAGAGGTCGTAGGTTCGAA
TCCTGCTATTCCGACCA
Downstream region at tRNA end position 
aagaattcag
Secondary structure (Cloverleaf model)
>W11171887	Pro	CGG
                   t      ACCA aagaattcag
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     A - T          T A
                    T     C G T C C     A
      C G A        A      | + | | |     G
    T       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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