The detailed information of tRNA gene sequence


Sequence ID>W11172543
Genome IDAFSN01000011
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesPseudoxanthomonas spadix BD-a59 [AFSN]
Start position on genome 404192
End posion on genome 404117
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccccgcccac
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCGGGAGTTCGATC
CTCCCTGGCTCCACCA
Downstream region at tRNA end position 
ccgttttgaa
Secondary structure (Cloverleaf model)
>W11172543	Ala	CGC
                   c      ACCA ccgttttgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          C T
                    T     C C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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