The detailed information of tRNA gene sequence


Sequence ID>W11173945
Genome IDAFUG01000036
Search identical group
Phylum/ClassBacillota
SpeciesMegasphaera sp. UPII 135-E [AFUG]
Start position on genome 28115
End posion on genome 28042
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cgctccaaat
tRNA gene sequence 
GGCGGCATAGCCAAGCGGTAAGGCAGAGGTCTGCAAAACCTTCATCCCCAGTTCGATTCT
GGGTGCCGCCTCCA
Downstream region at tRNA end position 
ttttttactt
Secondary structure (Cloverleaf model)
>W11173945	Cys	GCA
                   t      TCCA ttttttactt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T T
                    T     G G G T C     A
        G A        A      | | | | |     G
      C     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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