The detailed information of tRNA gene sequence


Sequence ID>W11174000
Genome IDAFUH01000001
Search identical group
Phylum/ClassBacillota
SpeciesPeptoniphilus sp. oral taxon 375 oral taxon 375 str. F0436 [AFUH]
Start position on genome 1821689
End posion on genome 1821613
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgccatagt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTCAGAGCATCCGGCTCATAACCGGCAGGTCCGGGGTTCAAG
TCCCTGAAGGCCCACCA
Downstream region at tRNA end position 
tttttttaca
Secondary structure (Cloverleaf model)
>W11174000	Met	CAT
                   t      ACCA tttttttaca
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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