The detailed information of tRNA gene sequence


Sequence ID>W11177492
Genome IDAGAY01000066
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesNeisseria shayeganii 871 [AGAY]
Start position on genome 1432
End posion on genome 1339
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttcgaaagct
tRNA gene sequence 
GGAGTAATGGCTGAGAGGCTGAAGGCACACCCCTGCTAAGGGTGCATGTGGGCTAAAACC
TGCATCGAGGGTTCGAATCCCTCTTACTCCGCCA
Downstream region at tRNA end position 
aataaattaa
Secondary structure (Cloverleaf model)
>W11177492	Ser	GCT
                   t      GCCA aataaattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     A - T          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         + | |                 T T
    C       A G G C
      T G A        A     CATGTGGGCTAAAACCTGCATC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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