The detailed information of tRNA gene sequence


Sequence ID>W11178580
Genome IDAGFB01000002
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThioalkalivibrio thiocyanoxidans ARh 4 [AGFB]
Start position on genome 484319
End posion on genome 484244
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctgcctctgc
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGCGACCGGGGTTCGAAT
CCCCGTGGGGACGCCA
Downstream region at tRNA end position 
tctcctttct
Secondary structure (Cloverleaf model)
>W11178580	Glu	TTC
                   c      GCCA tctcctttct
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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