The detailed information of tRNA gene sequence


Sequence ID>W11178630
Genome IDAGFC01000053
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThiocystis violascens DSM 198 [AGFC]
Start position on genome 28504
End posion on genome 28580
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
cccgaattaa
tRNA gene sequence 
GCGCCCGTAGCTCAGTTGGATAGAGCAACGGCCTTCTAAGCCGTGGGTCGCAGGTTCGAG
TCCTGCCGGGCGCGCCA
Downstream region at tRNA end position 
atagaacgaa
Secondary structure (Cloverleaf model)
>W11178630	Arg	TCT
                   a      GCCA atagaacgaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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