The detailed information of tRNA gene sequence


Sequence ID>W11180580
Genome IDAGIB01000030
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesHalomonas sp. HAL1 [AGIB]
Start position on genome 13254
End posion on genome 13330
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cccgttgaaa
tRNA gene sequence 
GGCTACGTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCCCCTGTTCAAA
TCAGGGCGTAGCCACCA
Downstream region at tRNA end position 
aagcttattg
Secondary structure (Cloverleaf model)
>W11180580	Met	CAT
                   a      ACCA aagcttattg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     G G G A C     A
      C G A        A      | | | | |     A
    T       C T C G       C C C T G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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