The detailed information of tRNA gene sequence


Sequence ID>W11180834
Genome IDAGIK01000001
Search identical group
Phylum/ClassCyanobacteriota
SpeciesSynechococcus sp. WH 8016 [AGIK]
Start position on genome 279393
End posion on genome 279306
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gaagcctcca
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTATGGCTCTGGTCTTGAAAACCAGCGTGTCTGCAAGGGCA
CCGTCGGTTCGAATCCGACCCTCTCCGCtc
Downstream region at tRNA end position 
aatagccaag
Secondary structure (Cloverleaf model)
>W11180834	Ser	TGA
                   a      GCtc aatagccaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A G C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T C G G     C
    G       + | + |                 T T
    T       T G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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