The detailed information of tRNA gene sequence


Sequence ID>W11181099
Genome IDAGIS01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesHyphomicrobium denitrificans 1NES1 [AGIS]
Start position on genome 498524
End posion on genome 498448
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
cgccgtagtc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCGCGCTTGATAAGCGTGAGGTCGGAAGTTCAAA
TCTTCCCAGGCCCACCA
Downstream region at tRNA end position 
tgatcactcg
Secondary structure (Cloverleaf model)
>W11181099	Ile	GAT
                   c      ACCA tgatcactcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C T T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G A A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    G + T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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