The detailed information of tRNA gene sequence


Sequence ID>W11187622
Genome IDCAFE01000216
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCandidatus Paraburkholderia kirkii kirkii UZHbot1 [CAFE]
Start position on genome 1463
End posion on genome 1374
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgccttgcc
tRNA gene sequence 
GGAGGTGTGGCCGAGCGGTTTAAGGCACCGGTCTTGAAAACCGGCAAAGGAGCGATCCTT
CCGTGAGTTCGAATCTCACCGCCTCCGCCA
Downstream region at tRNA end position 
gcctgatttc
Secondary structure (Cloverleaf model)
>W11187622	Ser	TGA
                   c      GCCA gcctgatttc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G C C G       G T G A G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CAAAGGAGCGATCCTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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