The detailed information of tRNA gene sequence


Sequence ID>C121002521
Genome IDCP002376
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. Gauthier [CP002376]
Start position on genome 353543
End posion on genome 353461
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctgcgcgcgg
tRNA gene sequence 
GCCGACGTGGTGAAACTGGCAGACACGACAGACTCAAAATCTGTTGGGGTAACCCCGTAA
GGGTTCAAGTCCCTTCGTCGGCAggt
Downstream region at tRNA end position 
gttttgtccg
Secondary structure (Cloverleaf model)
>C121002521	Leu	CAA
                   g      Aggt gttttgtccg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T T C C C     A
      C A A        G      | | | | |     A
    T       A G T G       A A G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGGGGTAACCCCGT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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