The detailed information of tRNA gene sequence


Sequence ID>C121001230
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 2899405
End posion on genome 2899331
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgaattttt
tRNA gene sequence 
GGGTGAGTAGCTCAGCTGGTTAGAGCGCACGGTTCACATCCGTGAGGTCGGGGGTTCGAG
TCCCTCCTCGCCCACtg
Downstream region at tRNA end position 
tacgcccttc
Secondary structure (Cloverleaf model)
>C121001230	Val	CAC
                   t      ACtg tacgcccttc
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C
                     A - T
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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