The detailed information of tRNA gene sequence


Sequence ID>C121002506
Genome IDCP002376
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pertenue str. Gauthier [CP002376]
Start position on genome 843795
End posion on genome 843879
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
gggttttctt
tRNA gene sequence 
GCCTCGATGGTGGAATTGGCAGACACGCTAGCTTCAGGTGCTAGTGCCTTCACCGGCGTG
GGAGTTCAAGTCTCCCTCGAGGCACtt
Downstream region at tRNA end position 
gcatactgct
Secondary structure (Cloverleaf model)
>C121002506	Leu	CAG
                   t      ACtt gcatactgct
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T          T G
                    T     C C C T C     A
      T A A        G      | | | | |     A
    T       G G T G       G G G A G     C
    G         | | |                 T T
    G       A C A C
      C A G        G     TGCCTTCACCGGCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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