The detailed information of tRNA gene sequence


Sequence ID>C121000428
Genome IDAP012051
Search identical group
Phylum/ClassCaldisericota
SpeciesCaldisericum exile AZM16c01 [AP012051]
Start position on genome 1127362
End posion on genome 1127288
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acctgaattt
tRNA gene sequence 
GGGCCCGTAGCTCAACGGCAGAGCGGTTGGCTCATAACCAATTGGTTCTTGGTTCGAATC
CAAGCGGGCCCACCA
Downstream region at tRNA end position 
tggaggaata
Secondary structure (Cloverleaf model)
>C121000428	Met	CAT
                   t      ACCA tggaggaata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G A A C C     A
        A A        A      | | | | |     G
      C     C T C G       C T T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     TGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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