The detailed information of tRNA gene sequence


Sequence ID>C121001197
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 547841
End posion on genome 547913
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttcctccc
tRNA gene sequence 
GGATCGGTAGCTCAACGGCAGAGCAGGGGGCTCATAACTCCTTGGTTACAGGTTCGAATC
CTGTCCGATCCACtc
Downstream region at tRNA end position 
ctccgctttc
Secondary structure (Cloverleaf model)
>C121001197	Met	CAT
                   c      ACtc ctccgctttc
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     G - C
                     G - C          T A
                    T     T G T C C     A
        A A        A      | | | | |     G
      C     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTT
                    G + T
                    G - C
                    G - C
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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