The detailed information of tRNA gene sequence


Sequence ID>C121001219
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 4058700
End posion on genome 4058774
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgtaatcgc
tRNA gene sequence 
CGCGGGGTGGAGCAGCGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTAGGTTCGATTC
CTACCCCCGCTACCT
Downstream region at tRNA end position 
caaagccgcc
Secondary structure (Cloverleaf model)
>C121001219	Met	CAT
                   c      ACCT caaagccgcc
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     C A T C C     A
        G A        G      | | | | |     G
      C     C G A G       G T A G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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