The detailed information of tRNA gene sequence


Sequence ID>C121001220
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 4058812
End posion on genome 4058888
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctaaatcc
tRNA gene sequence 
GGCGATGTAGCTCAGTCGGTTAGAGCGAGGGCTTCATAATCCCTAGGTCACTGGTTCAAG
TCCAGTCATCGCCACCA
Downstream region at tRNA end position 
aagccgtgcg
Secondary structure (Cloverleaf model)
>C121001220	Met	CAT
                   c      ACCA aagccgtgcg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    C   T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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