The detailed information of tRNA gene sequence


Sequence ID>C121001541
Genome IDCP001560
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesShimwellia blattae DSM 4481 = NBRC 105725 [CP001560]
Start position on genome 2786385
End posion on genome 2786461
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaagat
tRNA gene sequence 
GGCTACATAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAA
TCCCGTTGTAGCCACCA
Downstream region at tRNA end position 
tcttttttgc
Secondary structure (Cloverleaf model)
>C121001541	Met	CAT
                   t      ACCA tcttttttgc
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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