The detailed information of tRNA gene sequence


Sequence ID>C121005686
Genome IDCP003096
Search identical group
Phylum/ClassSynergistota
SpeciesThermovirga lienii DSM 17291 [CP003096]
Start position on genome 996005
End posion on genome 996081
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagctgacat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCAGGAAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCAACCA
Downstream region at tRNA end position 
ataaggcggt
Secondary structure (Cloverleaf model)
>C121005686	Met	CAT
                   t      ACCA ataaggcggt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    A       | | | |                 T T
    G       G C T C
      G A A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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