The detailed information of tRNA gene sequence


Sequence ID>C121005702
Genome IDCP003096
Search identical group
Phylum/ClassSynergistota
SpeciesThermovirga lienii DSM 17291 [CP003096]
Start position on genome 1190324
End posion on genome 1190249
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagctaagga
tRNA gene sequence 
GGGCCCATAGCTCAATTGGCAGAGCCACCGGCTCATAACCGGAAGGTTCCTGGTTCGAGT
CCAGGTGGGCCCACCA
Downstream region at tRNA end position 
ctatagagag
Secondary structure (Cloverleaf model)
>C121005702	Met	CAT
                   a      ACCA ctatagagag
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T G
                    T     G G A C C     A
      T A A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     AGGTT
                    A   A
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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