The detailed information of tRNA gene sequence


Sequence ID>C121009812
Genome IDCP003257
Search identical group
Phylum/ClassThermotogota
SpeciesMarinitoga piezophila KA3 [CP003257]
Start position on genome 49712
End posion on genome 49636
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taagtgagaa
tRNA gene sequence 
GGGCTCGTAGCTCAGTTGGTGAGAGCTTCCGGCTCATAACCGGGAGGTCGGTGGTTCGAA
TCCACCCGAGCCCACCA
Downstream region at tRNA end position 
gatgcgaggt
Secondary structure (Cloverleaf model)
>C121009812	Met	CAT
                   a      ACCA gatgcgaggt
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C C A C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T G A        T     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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