The detailed information of tRNA gene sequence


Sequence ID>C121010806
Genome IDCP003319
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia massiliae str. AZT80 [CP003319]
Start position on genome 133617
End posion on genome 133693
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tcttaattat
tRNA gene sequence 
TGCGGGGTGGAGCAGCTCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAGCCCCCGCTACCA
Downstream region at tRNA end position 
tatttttaaa
Secondary structure (Cloverleaf model)
>C121010806	Met	CAT
                   t      ACCA tatttttaaa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    T       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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