The detailed information of tRNA gene sequence


Sequence ID>C121011246
Genome IDCP003338
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia australis str. Cutlack [CP003338]
Start position on genome 1125682
End posion on genome 1125606
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttttccccat
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGTTAGAGCAACGGAATCATAATCCGTGTGTCGTGGGTTCAAC
TCCCTCCCTCGCTACCA
Downstream region at tRNA end position 
ttcattcatc
Secondary structure (Cloverleaf model)
>C121011246	Met	CAT
                   t      ACCA ttcattcatc
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T C
                    T     C T C C C     A
      C G A        A      |   | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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