The detailed information of tRNA gene sequence


Sequence ID>C121012368
Genome IDCP003397
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRickettsia typhi str. TH1527 [CP003397]
Start position on genome 961847
End posion on genome 961771
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cacataaaaa
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTTAGAGCACGCCGCTCATAACGGTGTGGTCGTAGGTTCAAG
TCCTACCAGCCCCACCA
Downstream region at tRNA end position 
cacacattct
Secondary structure (Cloverleaf model)
>C121012368	Met	CAT
                   a      ACCA cacacattct
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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